Transcript: ANKRD13B-004 ENST00000488766.1

Description

ankyrin repeat domain 13B [Source:HGNC Symbol;Acc:26363]

Gene Synonyms

FLJ25555

Location

Chromosome 17: 27,920,486-27,941,779 forward strand.

About this transcript

This transcript has 16 exons, is annotated with 19 domains and features, is associated with 6586 variant alleles and maps to 425 oligo probes.

Gene

This transcript is a product of gene ENSG00000198720.8 Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ANKRD13B-001	ENST00000394859.3	3214	626aa	ENSP00000378328.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS11251	K7ENT0 Q86YJ7	NM_152345 NP_689558	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ANKRD13B-005	ENST00000583728.1	582	68aa	ENSP00000467078.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	K7ENT0	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ANKRD13B-008	ENST00000579719.1	543	128aa	ENSP00000465708.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	K7EKP0	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ANKRD13B-004	ENST00000488766.1	2671	626aa	ENSP00000431958.1	Nonsense mediated decay	CCDS11251	K7ENT0 Q86YJ7	-	-
ANKRD13B-002	ENST00000487527.1	3023	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-	-	-
ANKRD13B-003	ENST00000493506.1	2465	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-	-	-
ANKRD13B-006	ENST00000578943.1	743	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-	-	-
ANKRD13B-007	ENST00000578811.1	558	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-	-	-

Summary

Statistics

Exons: 16, Coding exons: 15, Transcript length: 2,671 bps, Translation length: 626 residues

CCDS

This transcript is a member of the Human CCDS set: CCDS11251

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q86YJ7

Version

ENST00000488766.1

Type

Nonsense mediated decay

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000256080 (version 3)

Favourite species

All species

Recent locations

Transcript: ANKRD13B-004 ENST00000488766.1

Summary

Transcript-based displays