Transcript: ANKRD13B-008 ENST00000579719.1

Description

ankyrin repeat domain 13B [Source:HGNC Symbol;Acc:26363]

Gene Synonyms

FLJ25555

Location

Chromosome 17: 27,939,482-27,940,192 forward strand.

About this transcript

This transcript has 3 exons, is annotated with 4 domains and features, is associated with 338 variant alleles and maps to 62 oligo probes.

Gene

This transcript is a product of gene ENSG00000198720.8 Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ANKRD13B-001	ENST00000394859.3	3214	626aa	ENSP00000378328.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS11251	K7ENT0 Q86YJ7	NM_152345 NP_689558	The GENCODE set is the gene set for human and mouse. <a href="/Help/Glossary?id=500" class="popup">GENCODE Basic</a> is a subset of representative transcripts (splice variants).GENCODE basic,
ANKRD13B-005	ENST00000583728.1	582	68aa	ENSP00000467078.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	K7ENT0	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ANKRD13B-008	ENST00000579719.1	543	128aa	ENSP00000465708.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	K7EKP0	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ANKRD13B-004	ENST00000488766.1	2671	626aa	ENSP00000431958.1	Nonsense mediated decay	CCDS11251	K7ENT0 Q86YJ7	-	-
ANKRD13B-002	ENST00000487527.1	3023	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-	-	-
ANKRD13B-003	ENST00000493506.1	2465	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-	-	-
ANKRD13B-006	ENST00000578943.1	743	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-	-	-
ANKRD13B-007	ENST00000578811.1	558	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-	-	-

Summary

Statistics

Exons: 3, Coding exons: 3, Transcript length: 543 bps, Translation length: 128 residues

Incomplete CDS

5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete

Version

ENST00000579719.1

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000447827 (version 2)

Favourite species

All species

Recent locations

Transcript: ANKRD13B-008 ENST00000579719.1

Summary

Transcript-based displays