Transcript: ENST00000492796.1 CDC42SE1-003

Description

CDC42 small effector 1 [Source:HGNC Symbol;Acc:17719]

Gene Synonyms

SCIP1, SPEC1

Location

Chromosome 1: 151,025,422-151,032,091 reverse strand.

About this transcript

This transcript has 6 exons, is associated with 2773 variant alleles and maps to 421 oligo probes.

Gene

This transcript is a product of gene ENSG00000197622.8 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000439374.2	CDC42SE1-001	3498	79aa	ENSP00000475845.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS981	Q9NRR8	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000540998.1	CDC42SE1-202	3181	79aa	ENSP00000445647.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS981	Q9NRR8	NM_001038707.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000357235.5	CDC42SE1-201	3045	79aa	ENSP00000349773.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS981	Q9NRR8	NM_020239.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000492796.1	CDC42SE1-003	1174	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000470278.1	CDC42SE1-004	939	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000491825.1	CDC42SE1-005	837	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000483763.1	CDC42SE1-002	2379	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 6, Coding exons: 0, Transcript length: 1,174 bps,

Version

ENST00000492796.1

Type

Processed transcript

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000085098 (version 1)

Favourite species

All species

Recent locations

Transcript: ENST00000492796.1 CDC42SE1-003

Summary