Transcript: ENST00000439374.2 CDC42SE1-001

Description

CDC42 small effector 1 [Source:HGNC Symbol;Acc:17719]

Gene Synonyms

SCIP1, SPEC1

Location

Chromosome 1: 151,023,447-151,042,801 reverse strand.

About this transcript

This transcript has 8 exons, is annotated with 4 domains and features, is associated with 8391 variant alleles and maps to 639 oligo probes.

Gene

This transcript is a product of gene ENSG00000197622.8 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000439374.2	CDC42SE1-001	3498	79aa	ENSP00000475845.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS981	Q9NRR8	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000540998.1	CDC42SE1-202	3181	79aa	ENSP00000445647.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS981	Q9NRR8	NM_001038707.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000357235.5	CDC42SE1-201	3045	79aa	ENSP00000349773.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS981	Q9NRR8	NM_020239.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000492796.1	CDC42SE1-003	1174	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000470278.1	CDC42SE1-004	939	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000491825.1	CDC42SE1-005	837	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000483763.1	CDC42SE1-002	2379	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 8, Coding exons: 3, Transcript length: 3,498 bps, Translation length: 79 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q9NRR8

CCDS

This transcript is a member of the Human CCDS set: CCDS981

Version

ENST00000439374.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000085096 (version 2)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000439374.2 CDC42SE1-001

Summary