Transcript: ENST00000563181.1 NOXO1-004

Description

NADPH oxidase organizer 1 [Source:HGNC Symbol;Acc:19404]

Gene Synonyms

P41NOX, P41NOXA, P41NOXB, P41NOXC, SH3PXD5, SNX28

Location

Chromosome 16: 2,030,061-2,031,445 reverse strand.

About this transcript

This transcript has 3 exons, is associated with 1011 variant alleles and maps to 272 oligo probes.

Gene

This transcript is a product of gene ENSG00000196408.7 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000354249.4	NOXO1-001	1618	370aa	ENSP00000346195.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS10454	Q8NFA2	NM_172168.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000356120.4	NOXO1-002	1539	371aa	ENSP00000348435.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS10455	H3BN18 Q8NFA2	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000397280.4	NOXO1-003	1147	376aa	ENSP00000380450.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS42101	Q8NFA2	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000566005.1	NOXO1-005	1144	375aa	ENSP00000456800.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS58406	Q8NFA2	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000567471.1	NOXO1-006	582	76aa	ENSP00000454644.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H3BN18	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000563181.1	NOXO1-004	1106	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000569739.1	NOXO1-007	653	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 3, Coding exons: 0, Transcript length: 1,106 bps,

Version

ENST00000563181.1

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000434240 (version 1)

Favourite species

All species

Recent locations

Transcript: ENST00000563181.1 NOXO1-004

Summary