Transcript: ENST00000397280.4 NOXO1-003

Description

NADPH oxidase organizer 1 [Source:HGNC Symbol;Acc:19404]

Gene Synonyms

P41NOX, P41NOXA, P41NOXB, P41NOXC, SH3PXD5, SNX28

Location

Chromosome 16: 2,029,041-2,031,184 reverse strand.

About this transcript

This transcript has 8 exons, is annotated with 17 domains and features, is associated with 1784 variant alleles and maps to 264 oligo probes.

Gene

This transcript is a product of gene ENSG00000196408.7 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000354249.4	NOXO1-001	1618	370aa	ENSP00000346195.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS10454	Q8NFA2	NM_172168.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000356120.4	NOXO1-002	1539	371aa	ENSP00000348435.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS10455	H3BN18 Q8NFA2	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000397280.4	NOXO1-003	1147	376aa	ENSP00000380450.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS42101	Q8NFA2	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000566005.1	NOXO1-005	1144	375aa	ENSP00000456800.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS58406	Q8NFA2	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000567471.1	NOXO1-006	582	76aa	ENSP00000454644.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H3BN18	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000563181.1	NOXO1-004	1106	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000569739.1	NOXO1-007	653	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 8, Coding exons: 8, Transcript length: 1,147 bps, Translation length: 376 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q8NFA2

CCDS

This transcript is a member of the Human CCDS set: CCDS42101

Version

ENST00000397280.4

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000250612 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000397280.4 NOXO1-003

Summary