Transcript: ENST00000437094.1 NIPSNAP1-002

Description

nipsnap homolog 1 (C. elegans) [Source:HGNC Symbol;Acc:7827]

Location

About this transcript

This transcript has 7 exons, is annotated with 3 domains and features, is associated with 8770 variant alleles and maps to 168 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000216121.7	NIPSNAP1-001	2237	284aa	ENSP00000216121.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS13860	C9JDV8 Q9BPW8	NM_003634.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000415100.1	NIPSNAP1-003	661	221aa	ENSP00000407851.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9JDV8	-	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENST00000437094.1	NIPSNAP1-002	654	69aa	ENSP00000403448.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9JDV8	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000455496.1	NIPSNAP1-007	600	128aa	ENSP00000404227.1	Nonsense mediated decay		F8WCR5	-	-
ENST00000494966.1	NIPSNAP1-004	441	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000496944.1	NIPSNAP1-005	586	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 7, Coding exons: 3, Transcript length: 654 bps, Translation length: 69 residues

Incomplete CDS

3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete

Version

ENST00000437094.1

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000322118 (version 1)