Transcript: ENST00000308127.4 SSH3-001

Description

slingshot protein phosphatase 3 [Source:HGNC Symbol;Acc:30581]

Gene Synonyms

FLJ10928, FLJ20515, SSH3L

Location

Chromosome 11: 67,070,919-67,080,071 forward strand.

About this transcript

This transcript has 14 exons, is annotated with 17 domains and features, is associated with 4770 variant alleles and maps to 635 oligo probes.

Gene

This transcript is a product of gene ENSG00000172830.8 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000308127.4	SSH3-001	2871	659aa	ENSP00000312081.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS8157	Q8TE77	NM_017857.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000376757.5	SSH3-008	2587	471aa	ENSP00000365948.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q8TE77	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000308298.7	SSH3-011	2046	394aa	ENSP00000310055.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9JUG3	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000527821.1	SSH3-004	656	207aa	ENSP00000433902.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E9PIT5	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000532881.1	SSH3-002	2990	24aa	ENSP00000431788.1	Nonsense mediated decay		E9PJJ6	-	-
ENST00000532600.1	SSH3-010	555	41aa	ENSP00000432974.1	Nonsense mediated decay		E9PMS1	-	-
ENST00000532181.1	SSH3-006	948	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000529224.1	SSH3-009	673	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000531495.1	SSH3-005	548	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000534112.1	SSH3-003	544	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000525913.1	SSH3-007	264	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 14, Coding exons: 14, Transcript length: 2,871 bps, Translation length: 659 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q8TE77

CCDS

This transcript is a member of the Human CCDS set: CCDS8157

Version

ENST00000308127.4

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000393167 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000308127.4 SSH3-001

Summary