Transcript: ENST00000389927.4 ALCAM-201

Description

activated leukocyte cell adhesion molecule [Source:HGNC Symbol;Acc:400]

Gene Synonyms

CD166, MEMD

Location

Chromosome 3: 105,252,446-105,294,758 forward strand.

About this transcript

This transcript has 10 exons, is annotated with 15 domains and features, is associated with 17471 variant alleles and maps to 544 oligo probes.

Gene

This transcript is a product of gene ENSG00000170017.8 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000306107.5	ALCAM-001	4701	583aa	ENSP00000305988.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS33810	F5GXJ9 Q13740	NM_001627.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000472644.2	ALCAM-002	4189	570aa	ENSP00000419236.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS58841	Q13740	NM_001243280.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000465413.2	ALCAM-007	2496	344aa	ENSP00000418937.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q6ZS95	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000389927.4	ALCAM-201	2496	305aa	ENSP00000374577.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q6ZS95	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000486979.2	ALCAM-005	1818	532aa	ENSP00000418213.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F5GXJ9	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000481337.1	ALCAM-004	1242	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000460954.1	ALCAM-008	564	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000491388.2	ALCAM-006	2845	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000470756.1	ALCAM-003	1770	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000489178.1	ALCAM-009	783	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 10, Coding exons: 8, Transcript length: 2,496 bps, Translation length: 305 residues

Version

ENST00000389927.4

Type

Protein coding

Annotation Method

Annotation produced by the Ensembl genebuild.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000389927.4 ALCAM-201

Summary