Transcript: ENST00000554685.1 SHOX2-006

Description

short stature homeobox 2 [Source:HGNC Symbol;Acc:10854]

Gene Synonyms

OG12, OG12X, SHOT

Location

Chromosome 3: 157,820,465-157,823,949 reverse strand.

About this transcript

This transcript has 3 exons, is associated with 2182 variant alleles and maps to 140 oligo probes.

Gene

This transcript is a product of gene ENSG00000168779.15 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000490689.2	SHOX2-004	2975	190aa	ENSP00000451888.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		A6NLG4	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000389589.4	SHOX2-001	2072	355aa	ENSP00000374240.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS33884	O60902	NM_003030.4	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000425436.3	SHOX2-002	1890	331aa	ENSP00000398704.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS43164	O60902	NM_006884.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000483851.2	SHOX2-003	1796	319aa	ENSP00000419362.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS54664	A6NLG4 O60902	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000441443.2	SHOX2-201	1171	190aa	ENSP00000397099.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		A6NLG4	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000554685.1	SHOX2-006	761	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 3, Coding exons: 0, Transcript length: 761 bps,

Version

ENST00000554685.1

Type

Processed transcript

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000412000 (version 1)

Favourite species

All species

Recent locations

Transcript: ENST00000554685.1 SHOX2-006

Summary