Transcript: ENST00000435290.1 CX3CR1-003

Description

chemokine (C-X3-C motif) receptor 1 [Source:HGNC Symbol;Acc:2558]

Gene Synonyms

CCRL1, CMKBRL1, CMKDR1, GPR13, GPRV28, V28

Location

Chromosome 3: 39,307,502-39,321,930 reverse strand.

About this transcript

This transcript has 2 exons, is annotated with 20 domains and features, is associated with 5875 variant alleles and maps to 93 oligo probes.

Gene

This transcript is a product of gene ENSG00000168329.9 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000541347.1	CX3CR1-202	3255	355aa	ENSP00000439140.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS43069	C9JLM2 C9JN40 P49238	NM_001171171.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000542107.1	CX3CR1-203	3215	355aa	ENSP00000444928.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS43069	C9JLM2 C9JN40 P49238	NM_001171172.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000358309.3	CX3CR1-201	3151	387aa	ENSP00000351059.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS54571	C9JLM2 C9JN40 P49238	NM_001171174.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000399220.2	CX3CR1-001	3106	355aa	ENSP00000382166.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS43069	C9JLM2 C9JN40 P49238	NM_001337.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000435290.1	CX3CR1-003	699	166aa	ENSP00000394960.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9JLM2 C9JN40	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000412814.1	CX3CR1-004	559	106aa	ENSP00000408835.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9JLM2	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,

Summary

Statistics

Exons: 2, Coding exons: 1, Transcript length: 699 bps, Translation length: 166 residues

Incomplete CDS

3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete

Version

ENST00000435290.1

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000343615 (version 1)

Favourite species

All species

Recent locations

Transcript: ENST00000435290.1 CX3CR1-003

Summary