Transcript: ENST00000603128.1 NLRC3-001

Description

NLR family, CARD domain containing 3 [Source:HGNC Symbol;Acc:29889]

Gene Synonyms

CLR16.2, FLJ00348, NOD3

Location

Chromosome 16: 3,589,033-3,627,392 reverse strand.

About this transcript

This transcript has 20 exons, is associated with 20585 variant alleles and maps to 610 oligo probes.

Gene

This transcript is a product of gene ENSG00000167984.12 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	RefSeq	Flags
ENST00000301749.7	NLRC3-201	6391	1065aa	ENSP00000301749.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding	C3VPR7 Q7RTR2	NM_178844.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000359128.5	NLRC3-203	6379	1036aa	ENSP00000352039.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	B5MDB6	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000448023.2	NLRC3-204	6310	1111aa	ENSP00000414415.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	C9JLH9	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000324659.8	NLRC3-202	2413	660aa	ENSP00000323897.8	Gene/transcipt that contains an open reading frame (ORF).Protein coding	H3BLT9	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000603507.1	NLRC3-007	3340	1113aa	ENSP00000474358.1	Pseudogene owing to a SNP/indel but in other individuals/haplotypes/strains the gene is translated.Polymorphic pseudogene	-	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000419350.2	NLRC3-002	6603	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-	-	-
ENST00000603128.1	NLRC3-001	6402	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-	-	-
ENST00000603055.1	NLRC3-006	1158	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-	-	-
ENST00000604347.1	NLRC3-004	589	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-	-	-

Summary

Statistics

Exons: 20, Coding exons: 0, Transcript length: 6,402 bps,

Version

ENST00000603128.1

Type

Processed transcript

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000437606 (version 2)

Favourite species

All species

Recent locations

Transcript: ENST00000603128.1 NLRC3-001

Summary