Transcript: ENST00000419350.2 NLRC3-002

Description

NLR family, CARD domain containing 3 [Source:HGNC Symbol;Acc:29889]

Gene Synonyms

CLR16.2, FLJ00348, NOD3

Location

Chromosome 16: 3,589,038-3,627,401 reverse strand.

About this transcript

This transcript has 21 exons, is associated with 20590 variant alleles and maps to 572 oligo probes.

Gene

This transcript is a product of gene ENSG00000167984.12 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	RefSeq	Flags
ENST00000301749.7	NLRC3-201	6391	1065aa	ENSP00000301749.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding	C3VPR7 Q7RTR2	NM_178844.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000359128.5	NLRC3-203	6379	1036aa	ENSP00000352039.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	B5MDB6	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000448023.2	NLRC3-204	6310	1111aa	ENSP00000414415.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	C9JLH9	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000324659.8	NLRC3-202	2413	660aa	ENSP00000323897.8	Gene/transcipt that contains an open reading frame (ORF).Protein coding	H3BLT9	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000603507.1	NLRC3-007	3340	1113aa	ENSP00000474358.1	Pseudogene owing to a SNP/indel but in other individuals/haplotypes/strains the gene is translated.Polymorphic pseudogene	-	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000419350.2	NLRC3-002	6603	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-	-	-
ENST00000603128.1	NLRC3-001	6402	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-	-	-
ENST00000603055.1	NLRC3-006	1158	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-	-	-
ENST00000604347.1	NLRC3-004	589	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-	-	-

Summary

Statistics

Exons: 21, Coding exons: 0, Transcript length: 6,603 bps,

Version

ENST00000419350.2

Type

Processed transcript

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000437891 (version 1)

Favourite species

All species

Recent locations

Transcript: ENST00000419350.2 NLRC3-002

Summary