Transcript: ENST00000467387.1 SPTA1-003

Description

spectrin, alpha, erythrocytic 1 (elliptocytosis 2) [Source:HGNC Symbol;Acc:11272]

Gene Synonyms

EL2, HPP, HS3, SPH3, SPTA

Location

Chromosome 1: 158,647,517-158,656,398 reverse strand.

About this transcript

This transcript has 4 exons, is annotated with 9 domains and features, is associated with 4686 variant alleles and maps to 105 oligo probes.

Gene

This transcript is a product of gene ENSG00000163554.7 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000368147.4	SPTA1-001	7999	2419aa	ENSP00000357129.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS41423	O60686 P02549	NM_003126.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000467387.1	SPTA1-003	465	124aa	ENSP00000476485.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000485680.1	SPTA1-010	422	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000461624.1	SPTA1-005	930	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000492934.1	SPTA1-007	771	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000484520.1	SPTA1-006	769	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000465741.1	SPTA1-004	718	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000481212.1	SPTA1-009	643	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000498708.1	SPTA1-008	600	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 4, Coding exons: 4, Transcript length: 465 bps, Translation length: 124 residues

Incomplete CDS

3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete

Version

ENST00000467387.1

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000089863 (version 2)

Favourite species

All species

Recent locations

Transcript: ENST00000467387.1 SPTA1-003

Summary