Transcript: ENST00000426778.1 ERCC3-005

Description

excision repair cross-complementing rodent repair deficiency, complementation group 3 [Source:HGNC Symbol;Acc:3435]

Gene Synonyms

BTF2, GTF2H, RAD25, TFIIH, XPB, XPBC

Location

Chromosome 2: 128,014,866-128,051,721 reverse strand.

About this transcript

This transcript has 15 exons, is annotated with 2 domains and features, is associated with 16681 variant alleles and maps to 616 oligo probes.

Gene

This transcript is a product of gene ENSG00000163161.8 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000493187.2	ERCC3-201	2920	718aa	ENSP00000444796.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		G3V1S1	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000285398.2	ERCC3-001	2750	782aa	ENSP00000285398.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS2144	G3V1S1 P19447	NM_000122.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000456257.1	ERCC3-011	563	188aa	ENSP00000408901.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENST00000445889.1	ERCC3-004	2920	71aa	ENSP00000390888.1	Nonsense mediated decay		F2Z2V4	-	-
ENST00000426778.1	ERCC3-005	2916	71aa	ENSP00000415335.1	Nonsense mediated decay		F2Z2V4	-	-
ENST00000491292.1	ERCC3-006	4018	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000494464.1	ERCC3-003	1367	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000462306.1	ERCC3-002	963	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000460485.1	ERCC3-010	815	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000490062.1	ERCC3-007	576	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 15, Coding exons: 1, Transcript length: 2,916 bps, Translation length: 71 residues

Version

ENST00000426778.1

Type

Nonsense mediated decay

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000331032 (version 2)

Favourite species

All species

Recent locations

Transcript: ENST00000426778.1 ERCC3-005

Summary