Transcript: ENST00000285398.2 ERCC3-001

Description

excision repair cross-complementing rodent repair deficiency, complementation group 3 [Source:HGNC Symbol;Acc:3435]

Gene Synonyms

BTF2, GTF2H, RAD25, TFIIH, XPB, XPBC

Location

Chromosome 2: 128,014,866-128,051,752 reverse strand.

About this transcript

This transcript has 15 exons, is annotated with 31 domains and features, is associated with 16709 variant alleles and maps to 534 oligo probes.

Gene

This transcript is a product of gene ENSG00000163161.8 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000493187.2	ERCC3-201	2920	718aa	ENSP00000444796.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		G3V1S1	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000285398.2	ERCC3-001	2750	782aa	ENSP00000285398.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS2144	G3V1S1 P19447	NM_000122.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000456257.1	ERCC3-011	563	188aa	ENSP00000408901.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENST00000445889.1	ERCC3-004	2920	71aa	ENSP00000390888.1	Nonsense mediated decay		F2Z2V4	-	-
ENST00000426778.1	ERCC3-005	2916	71aa	ENSP00000415335.1	Nonsense mediated decay		F2Z2V4	-	-
ENST00000491292.1	ERCC3-006	4018	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000494464.1	ERCC3-003	1367	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000462306.1	ERCC3-002	963	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000460485.1	ERCC3-010	815	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000490062.1	ERCC3-007	576	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 15, Coding exons: 15, Transcript length: 2,750 bps, Translation length: 782 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: P19447

CCDS

This transcript is a member of the Human CCDS set: CCDS2144

Version

ENST00000285398.2

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000331028 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000285398.2 ERCC3-001

Summary