Transcript: ENST00000444798.1 CACFD1-005

Description

calcium channel flower domain containing 1 [Source:HGNC Symbol;Acc:1365]

Gene Synonyms

C9orf7, D9S2135, FLOWER, flower

Location

Chromosome 9: 136,327,293-136,333,150 forward strand.

About this transcript

This transcript has 4 exons, is annotated with 5 domains and features, is associated with 2661 variant alleles and maps to 202 oligo probes.

Gene

This transcript is a product of gene ENSG00000160325.10 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000316948.4	CACFD1-001	2794	172aa	ENSP00000317121.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS6974	Q9UGQ2	NM_017586.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000291722.7	CACFD1-002	2688	130aa	ENSP00000291722.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS48051	Q9UGQ2	NM_001135775.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000542192.1	CACFD1-202	1277	191aa	ENSP00000444328.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS56592	Q9UGQ2	NM_001242370.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000540581.1	CACFD1-201	1033	233aa	ENSP00000440832.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS56591	Q9UGQ2	NM_001242369.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000444798.1	CACFD1-005	356	114aa	ENSP00000414495.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F6TGH8	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000489519.1	CACFD1-004	795	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000474734.1	CACFD1-003	689	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 4, Coding exons: 4, Transcript length: 356 bps, Translation length: 114 residues

Incomplete CDS

3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete

Version

ENST00000444798.1

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000054919 (version 2)

Favourite species

All species

Recent locations

Transcript: ENST00000444798.1 CACFD1-005

Summary