Transcript: ENST00000476848.1 TMPRSS3-007

Description

transmembrane protease, serine 3 [Source:HGNC Symbol;Acc:11877]

Gene Synonyms

DFNB10, DFNB8, ECHOS1, TADG12

Location

Chromosome 21: 43,791,999-43,803,860 reverse strand.

About this transcript

This transcript has 5 exons, is associated with 6033 variant alleles and maps to 416 oligo probes.

Gene

This transcript is a product of gene ENSG00000160183.9 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000291532.3	TMPRSS3-001	3193	454aa	ENSP00000291532.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS13686	P57727	NM_032404.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000380399.1	TMPRSS3-201	3192	538aa	ENSP00000369762.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		P57727	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000398405.1	TMPRSS3-004	2754	451aa	ENSP00000381442.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B7WPR2	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000433957.2	TMPRSS3-002	2403	453aa	ENSP00000411013.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS58790	P57727	NM_024022.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000398397.3	TMPRSS3-003	1342	344aa	ENSP00000381434.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS42939	P57727	NM_032405.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000474596.1	TMPRSS3-006	2105	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000478680.1	TMPRSS3-008	416	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000476848.1	TMPRSS3-007	2969	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000482761.1	TMPRSS3-005	2524	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 5, Coding exons: 0, Transcript length: 2,969 bps,

Version

ENST00000476848.1

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000195353 (version 1)

Favourite species

All species

Recent locations

Transcript: ENST00000476848.1 TMPRSS3-007

Summary