Transcript: ENST00000398405.1 TMPRSS3-004

Description

transmembrane protease, serine 3 [Source:HGNC Symbol;Acc:11877]

Gene Synonyms

DFNB10, DFNB8, ECHOS1, TADG12

Location

Chromosome 21: 43,791,999-43,816,052 reverse strand.

About this transcript

This transcript has 12 exons, is annotated with 27 domains and features, is associated with 12134 variant alleles and maps to 575 oligo probes.

Gene

This transcript is a product of gene ENSG00000160183.9 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000291532.3	TMPRSS3-001	3193	454aa	ENSP00000291532.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS13686	P57727	NM_032404.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000380399.1	TMPRSS3-201	3192	538aa	ENSP00000369762.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		P57727	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000398405.1	TMPRSS3-004	2754	451aa	ENSP00000381442.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B7WPR2	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000433957.2	TMPRSS3-002	2403	453aa	ENSP00000411013.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS58790	P57727	NM_024022.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000398397.3	TMPRSS3-003	1342	344aa	ENSP00000381434.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS42939	P57727	NM_032405.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000474596.1	TMPRSS3-006	2105	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000478680.1	TMPRSS3-008	416	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000476848.1	TMPRSS3-007	2969	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000482761.1	TMPRSS3-005	2524	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 12, Coding exons: 12, Transcript length: 2,754 bps, Translation length: 451 residues

Version

ENST00000398405.1

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000195350 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000398405.1 TMPRSS3-004

Summary