Transcript: ALS2CR12-001 ENST00000286190.5

Description

amyotrophic lateral sclerosis 2 (juvenile) chromosome region, candidate 12 [Source:HGNC Symbol;Acc:14439]

Location

Chromosome 2: 202,152,994-202,216,174 reverse strand.

About this transcript

This transcript has 14 exons, is annotated with 9 domains and features, is associated with 14663 variant alleles and maps to 575 oligo probes.

Gene

This transcript is a product of gene ENSG00000155749.8 Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ALS2CR12-201	ENST00000405148.2	2013	445aa	ENSP00000385098.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS2346	C9JTY0 Q96Q35	NM_139163 NP_631902	The GENCODE set is the gene set for human and mouse. <a href="/Help/Glossary?id=500" class="popup">GENCODE Basic</a> is a subset of representative transcripts (splice variants).GENCODE basic,
ALS2CR12-002	ENST00000392257.3	1943	422aa	ENSP00000376086.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS46488	C9JTY0 Q96Q35	NM_001127391 NP_001120863	The GENCODE set is the gene set for human and mouse. <a href="/Help/Glossary?id=500" class="popup">GENCODE Basic</a> is a subset of representative transcripts (splice variants).GENCODE basic,
ALS2CR12-001	ENST00000286190.5	1769	445aa	ENSP00000286190.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS2346	C9JTY0 Q96Q35	-	The GENCODE set is the gene set for human and mouse. <a href="/Help/Glossary?id=500" class="popup">GENCODE Basic</a> is a subset of representative transcripts (splice variants).GENCODE basic,
ALS2CR12-004	ENST00000439709.1	1626	422aa	ENSP00000412073.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS46488	C9JTY0 Q96Q35	-	The GENCODE set is the gene set for human and mouse. <a href="/Help/Glossary?id=500" class="popup">GENCODE Basic</a> is a subset of representative transcripts (splice variants).GENCODE basic,
ALS2CR12-008	ENST00000415745.1	782	124aa	ENSP00000402327.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ALS2CR12-009	ENST00000418364.1	458	49aa	ENSP00000407585.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	C9JTY0	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ALS2CR12-005	ENST00000425488.1	430	143aa	ENSP00000393945.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	C9JZS0	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ALS2CR12-006	ENST00000448967.1	721	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-	-	-	-
ALS2CR12-003	ENST00000494171.1	2075	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-	-	-
ALS2CR12-007	ENST00000494223.1	394	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-	-	-

Summary

Statistics

Exons: 14, Coding exons: 14, Transcript length: 1,769 bps, Translation length: 445 residues

CCDS

This transcript is a member of the Human CCDS set: CCDS2346

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q96Q35

Version

ENST00000286190.5

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000256286 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

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Recent locations

Transcript: ALS2CR12-001 ENST00000286190.5

Summary

Transcript-based displays