Transcript: ENST00000418364.1 ALS2CR12-009

Description

amyotrophic lateral sclerosis 2 (juvenile) chromosome region, candidate 12 [Source:HGNC Symbol;Acc:14439]

Location

Chromosome 2: 202,215,472-202,216,805 reverse strand.

About this transcript

This transcript has 3 exons, is annotated with 2 domains and features, is associated with 520 variant alleles and maps to 101 oligo probes.

Gene

This transcript is a product of gene ENSG00000155749.8 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000405148.2	ALS2CR12-201	2013	445aa	ENSP00000385098.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS2346	C9JTY0 Q96Q35	NM_139163.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000392257.3	ALS2CR12-002	1943	422aa	ENSP00000376086.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS46488	C9JTY0 Q96Q35	NM_001127391.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000286190.5	ALS2CR12-001	1769	445aa	ENSP00000286190.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS2346	C9JTY0 Q96Q35	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000439709.1	ALS2CR12-004	1626	422aa	ENSP00000412073.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS46488	C9JTY0 Q96Q35	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000415745.1	ALS2CR12-008	782	124aa	ENSP00000402327.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000418364.1	ALS2CR12-009	458	49aa	ENSP00000407585.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9JTY0	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000425488.1	ALS2CR12-005	430	143aa	ENSP00000393945.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9JZS0	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000448967.1	ALS2CR12-006	721	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000494171.1	ALS2CR12-003	2075	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000494223.1	ALS2CR12-007	394	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 3, Coding exons: 2, Transcript length: 458 bps, Translation length: 49 residues

Incomplete CDS

3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete

Version

ENST00000418364.1

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000336906 (version 1)

Favourite species

All species

Recent locations

Transcript: ENST00000418364.1 ALS2CR12-009

Summary