Transcript: ENST00000523234.1 AGPAT5-002

Description

1-acylglycerol-3-phosphate O-acyltransferase 5 [Source:HGNC Symbol;Acc:20886]

Gene Synonyms

1AGPAT5, FLJ11210, LPAAT-e, LPAAT-epsilon, LPAATE

Location

About this transcript

This transcript has 7 exons, is annotated with 4 domains and features, is associated with 31933 variant alleles and maps to 452 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000285518.6	AGPAT5-001	3682	364aa	ENSP00000285518.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS34796	Q6NUM7 Q9NUQ2	NM_018361.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000518327.1	AGPAT5-003	852	181aa	ENSP00000430751.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000523234.1	AGPAT5-002	2525	88aa	ENSP00000430016.1	Nonsense mediated decay		E5RH21	-	-
ENST00000523586.1	AGPAT5-004	468	71aa	ENSP00000428152.1	Nonsense mediated decay		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000530716.1	AGPAT5-006	573	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000533648.1	AGPAT5-005	560	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000533159.1	AGPAT5-007	488	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 7, Coding exons: 2, Transcript length: 2,525 bps, Translation length: 88 residues

Version

ENST00000523234.1

Type

Nonsense mediated decay

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000374685 (version 1)