Transcript: ENST00000285518.6 AGPAT5-001

Description

1-acylglycerol-3-phosphate O-acyltransferase 5 [Source:HGNC Symbol;Acc:20886]

Gene Synonyms

1AGPAT5, FLJ11210, LPAAT-e, LPAAT-epsilon, LPAATE

Location

About this transcript

This transcript has 8 exons, is annotated with 10 domains and features, is associated with 32707 variant alleles and maps to 580 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000285518.6	AGPAT5-001	3682	364aa	ENSP00000285518.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS34796	Q6NUM7 Q9NUQ2	NM_018361.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000518327.1	AGPAT5-003	852	181aa	ENSP00000430751.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000523234.1	AGPAT5-002	2525	88aa	ENSP00000430016.1	Nonsense mediated decay		E5RH21	-	-
ENST00000523586.1	AGPAT5-004	468	71aa	ENSP00000428152.1	Nonsense mediated decay		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000530716.1	AGPAT5-006	573	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000533648.1	AGPAT5-005	560	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000533159.1	AGPAT5-007	488	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 8, Coding exons: 8, Transcript length: 3,682 bps, Translation length: 364 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q9NUQ2

CCDS

This transcript is a member of the Human CCDS set: CCDS34796

Version

ENST00000285518.6

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000374684 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.