Transcript: ENST00000520210.1 TCEB1-003

Description

transcription elongation factor B (SIII), polypeptide 1 (15kDa, elongin C) [Source:HGNC Symbol;Acc:11617]

Gene Synonyms

SIII, eloC

Location

Chromosome 8: 74,857,843-74,884,405 reverse strand.

About this transcript

This transcript has 3 exons, is annotated with 5 domains and features, is associated with 12481 variant alleles and maps to 545 oligo probes.

Gene

This transcript is a product of gene ENSG00000154582.12 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000602840.1	TCEB1-005	2780	65aa	ENSP00000473408.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		R4GMY8	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000518127.1	TCEB1-004	1943	112aa	ENSP00000428334.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS34910	E5RHG8 Q15369	NM_001204862.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000520242.1	TCEB1-001	1573	112aa	ENSP00000428171.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS34910	E5RHG8 Q15369	NM_005648.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000520210.1	TCEB1-003	1451	96aa	ENSP00000430224.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS56539	Q15369	NM_001204864.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000522337.1	TCEB1-010	816	112aa	ENSP00000429906.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS34910	E5RHG8 Q15369	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000519487.1	TCEB1-006	814	112aa	ENSP00000429596.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS34910	E5RHG8 Q15369	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000523815.1	TCEB1-008	719	112aa	ENSP00000428074.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS34910	E5RHG8 Q15369	NM_001204861.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000284811.8	TCEB1-007	683	112aa	ENSP00000284811.8	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS34910	E5RHG8 Q15369	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000519082.1	TCEB1-009	634	89aa	ENSP00000429789.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E5RHG8	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,

Summary

Statistics

Exons: 3, Coding exons: 2, Transcript length: 1,451 bps, Translation length: 96 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q15369

CCDS

This transcript is a member of the Human CCDS set: CCDS56539

Version

ENST00000520210.1

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000379016 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000520210.1 TCEB1-003

Summary