Transcript: ENST00000518127.1 TCEB1-004

Description

transcription elongation factor B (SIII), polypeptide 1 (15kDa, elongin C) [Source:HGNC Symbol;Acc:11617]

Gene Synonyms

SIII, eloC

Location

Chromosome 8: 74,857,354-74,884,522 reverse strand.

About this transcript

This transcript has 4 exons, is annotated with 5 domains and features, is associated with 12818 variant alleles and maps to 546 oligo probes.

Gene

This transcript is a product of gene ENSG00000154582.12 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000602840.1	TCEB1-005	2780	65aa	ENSP00000473408.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		R4GMY8	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000518127.1	TCEB1-004	1943	112aa	ENSP00000428334.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS34910	E5RHG8 Q15369	NM_001204862.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000520242.1	TCEB1-001	1573	112aa	ENSP00000428171.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS34910	E5RHG8 Q15369	NM_005648.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000520210.1	TCEB1-003	1451	96aa	ENSP00000430224.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS56539	Q15369	NM_001204864.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000522337.1	TCEB1-010	816	112aa	ENSP00000429906.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS34910	E5RHG8 Q15369	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000519487.1	TCEB1-006	814	112aa	ENSP00000429596.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS34910	E5RHG8 Q15369	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000523815.1	TCEB1-008	719	112aa	ENSP00000428074.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS34910	E5RHG8 Q15369	NM_001204861.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000284811.8	TCEB1-007	683	112aa	ENSP00000284811.8	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS34910	E5RHG8 Q15369	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000519082.1	TCEB1-009	634	89aa	ENSP00000429789.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E5RHG8	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,

Summary

Statistics

Exons: 4, Coding exons: 3, Transcript length: 1,943 bps, Translation length: 112 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q15369

CCDS

This transcript is a member of the Human CCDS set: CCDS34910

Version

ENST00000518127.1

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000379014 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000518127.1 TCEB1-004

Summary