Transcript: ENST00000310823.3 ADAM17-001

Description

ADAM metallopeptidase domain 17 [Source:HGNC Symbol;Acc:195]

Gene Synonyms

ADAM18, CD156B, CSVP, NISBD, TACE, cSVP

Location

Chromosome 2: 9,628,615-9,695,917 reverse strand.

About this transcript

This transcript has 19 exons, is annotated with 16 domains and features, is associated with 29096 variant alleles and maps to 926 oligo probes.

Gene

This transcript is a product of gene ENSG00000151694.8 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000310823.3	ADAM17-001	4349	824aa	ENSP00000309968.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS1665	B2RNB2 P78536 Q53RF5 Q53RS1 Q53S40	NM_003183.4	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000497134.1	ADAM17-003	1873	285aa	ENSP00000418728.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E7EUI5 Q53RF5 Q53S40	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000478059.1	ADAM17-002	1073	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 19, Coding exons: 19, Transcript length: 4,349 bps, Translation length: 824 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: P78536

CCDS

This transcript is a member of the Human CCDS set: CCDS1665

Version

ENST00000310823.3

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Stop codons

This transcript has a variant, rs2230818, that causes a stop codon to be gained in at least 10% of HapMap or 1000 Genome population(s) CSHL-HAPMAP:HapMap-CEU, CSHL-HAPMAP:HapMap-HCB, CSHL-HAPMAP:HAPMAP-LWK, CSHL-HAPMAP:HapMap-JPT, CSHL-HAPMAP:HAPMAP-ASW, CSHL-HAPMAP:HapMap-YRI, CSHL-HAPMAP:HAPMAP-MKK.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000206857 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000310823.3 ADAM17-001

Summary