Transcript: ADAM17-003 ENST00000497134.1

Description

ADAM metallopeptidase domain 17 [Source:HGNC Symbol;Acc:195]

Gene Synonyms

ADAM18, CD156B, CSVP, NISBD, TACE, cSVP

Location

Chromosome 2: 9,661,725-9,695,921 reverse strand.

About this transcript

This transcript has 8 exons, is annotated with 7 domains and features, is associated with 8524 variant alleles and maps to 240 oligo probes.

Gene

This transcript is a product of gene ENSG00000151694.8 Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ADAM17-001	ENST00000310823.3	4349	824aa	ENSP00000309968.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS1665	B2RNB2 P78536 Q53RF5 Q53RS1 Q53S40	NM_003183 NP_003174	The GENCODE set is the gene set for human and mouse. <a href="/Help/Glossary?id=500" class="popup">GENCODE Basic</a> is a subset of representative transcripts (splice variants).GENCODE basic,
ADAM17-003	ENST00000497134.1	1873	285aa	ENSP00000418728.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	E7EUI5 Q53RF5 Q53S40	-	The GENCODE set is the gene set for human and mouse. <a href="/Help/Glossary?id=500" class="popup">GENCODE Basic</a> is a subset of representative transcripts (splice variants).GENCODE basic,
ADAM17-002	ENST00000478059.1	1073	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-	-	-

Summary

Statistics

Exons: 8, Coding exons: 8, Transcript length: 1,873 bps, Translation length: 285 residues

Version

ENST00000497134.1

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Stop codons

This transcript has a variant, rs2230818, that causes a stop codon to be gained in at least 10% of HapMap or 1000 Genome population(s) CSHL-HAPMAP:HAPMAP-MKK, CSHL-HAPMAP:HapMap-HCB, CSHL-HAPMAP:HapMap-JPT, CSHL-HAPMAP:HapMap-YRI, CSHL-HAPMAP:HapMap-CEU, CSHL-HAPMAP:HAPMAP-ASW, CSHL-HAPMAP:HAPMAP-LWK.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000353336 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ADAM17-003 ENST00000497134.1

Summary

Transcript-based displays