Transcript: ENST00000274963.8 FGD2-001

Description

FYVE, RhoGEF and PH domain containing 2 [Source:HGNC Symbol;Acc:3664]

Gene Synonyms

ZFYVE4

Location

Chromosome 6: 36,973,423-36,996,846 forward strand.

About this transcript

This transcript has 16 exons, is annotated with 24 domains and features, is associated with 11239 variant alleles and maps to 607 oligo probes.

Gene

This transcript is a product of gene ENSG00000146192.10 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000274963.8	FGD2-001	3046	655aa	ENSP00000274963.8	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS4829	Q7Z6J4	NM_173558.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000373535.2	FGD2-003	2197	102aa	ENSP00000362635.2	Nonsense mediated decay		H7BY95	-	-
ENST00000497659.1	FGD2-011	541	104aa	ENSP00000419657.1	Nonsense mediated decay		F8WEZ2	-	-
ENST00000493635.1	FGD2-009	5771	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000494343.1	FGD2-007	2931	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000464083.1	FGD2-006	2723	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000487920.1	FGD2-010	2617	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000489356.1	FGD2-002	1438	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000470273.1	FGD2-008	1255	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000487975.1	FGD2-005	1010	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000459781.1	FGD2-012	866	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 16, Coding exons: 16, Transcript length: 3,046 bps, Translation length: 655 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q7Z6J4

CCDS

This transcript is a member of the Human CCDS set: CCDS4829

Version

ENST00000274963.8

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000040398 (version 2)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000274963.8 FGD2-001

Summary