Transcript: ENST00000474090.1 NR1I2-004

Description

nuclear receptor subfamily 1, group I, member 2 [Source:HGNC Symbol;Acc:7968]

Gene Synonyms

BXR, NR1I2, ONR1, PAR, PAR1, PAR2, PARq, PRR, PXR, SAR, SXR

Location

About this transcript

This transcript has 3 exons, is associated with 12741 variant alleles and maps to 110 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000393716.2	NR1I2-002	4417	434aa	ENSP00000377319.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS43136	B3KVM5 J3KPQ3	NM_003889.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000466380.1	NR1I2-003	4306	397aa	ENSP00000420297.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS54627	H0Y8E2	NM_033013.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000337940.4	NR1I2-001	2743	473aa	ENSP00000336528.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS2995	B3KVM5 F1D8P9 F1DAL3 J3KPQ3 O75469	NM_022002.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000493757.1	NR1I2-005	2709	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000474090.1	NR1I2-004	977	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 3, Coding exons: 0, Transcript length: 977 bps,

Version

ENST00000474090.1

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000355129 (version 1)