Transcript: ENST00000496559.2 LRIG1-004

Description

leucine-rich repeats and immunoglobulin-like domains 1 [Source:HGNC Symbol;Acc:17360]

Gene Synonyms

DKFZP586O1624, LIG-1, LIG1

Location

Chromosome 3: 66,429,222-66,456,637 reverse strand.

About this transcript

This transcript has 12 exons, is associated with 15477 variant alleles and maps to 415 oligo probes.

Gene

This transcript is a product of gene ENSG00000144749.9 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000383703.3	LRIG1-002	5283	1070aa	ENSP00000373208.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q96JA1	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000273261.3	LRIG1-001	5273	1093aa	ENSP00000273261.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS33783	Q96JA1	NM_015541.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000496559.2	LRIG1-004	4129	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000495037.1	LRIG1-005	2336	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000498287.1	LRIG1-006	689	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000497721.1	LRIG1-009	598	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000475366.1	LRIG1-007	504	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000495671.1	LRIG1-008	409	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000491821.1	LRIG1-010	580	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 12, Coding exons: 0, Transcript length: 4,129 bps,

Version

ENST00000496559.2

Type

Processed transcript

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000351933 (version 1)

Favourite species

All species

Recent locations

Transcript: ENST00000496559.2 LRIG1-004

Summary