Transcript: ENST00000491821.1 LRIG1-010

Description

leucine-rich repeats and immunoglobulin-like domains 1 [Source:HGNC Symbol;Acc:17360]

Gene Synonyms

DKFZP586O1624, LIG-1, LIG1

Location

Chromosome 3: 66,460,178-66,463,355 reverse strand.

About this transcript

This transcript has 2 exons, is associated with 1717 variant alleles and maps to 69 oligo probes.

Gene

This transcript is a product of gene ENSG00000144749.9 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000383703.3	LRIG1-002	5283	1070aa	ENSP00000373208.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q96JA1	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000273261.3	LRIG1-001	5273	1093aa	ENSP00000273261.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS33783	Q96JA1	NM_015541.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000496559.2	LRIG1-004	4129	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000495037.1	LRIG1-005	2336	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000498287.1	LRIG1-006	689	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000497721.1	LRIG1-009	598	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000475366.1	LRIG1-007	504	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000495671.1	LRIG1-008	409	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000491821.1	LRIG1-010	580	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 2, Coding exons: 0, Transcript length: 580 bps,

Version

ENST00000491821.1

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000351939 (version 1)

Favourite species

All species

Recent locations

Transcript: ENST00000491821.1 LRIG1-010

Summary