Transcript: ENST00000498614.1 COL6A1-002

Description

collagen, type VI, alpha 1 [Source:HGNC Symbol;Acc:2211]

Gene Synonyms

OPLL

Location

About this transcript

This transcript has 6 exons, is associated with 2819 variant alleles and maps to 444 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000361866.3	COL6A1-001	4238	1028aa	ENSP00000355180.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS13727	P12109 Q05BT9	NM_001848.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000498614.1	COL6A1-002	2358	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000486023.1	COL6A1-003	968	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000463060.1	COL6A1-006	863	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000466285.1	COL6A1-005	500	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000492851.1	COL6A1-004	435	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 6, Coding exons: 0, Transcript length: 2,358 bps,

Version

ENST00000498614.1

Type

Processed transcript

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000206878 (version 1)