Transcript: ENST00000589672.1 PPAP2C-006

Description

phosphatidic acid phosphatase type 2C [Source:HGNC Symbol;Acc:9230]

Gene Synonyms

LPP2, PAP-2c, PAP2-g

Location

Chromosome 19: 287,161-288,530 reverse strand.

About this transcript

This transcript has 2 exons, is associated with 787 variant alleles and maps to 103 oligo probes.

Gene

This transcript is a product of gene ENSG00000141934.5 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000269812.3	PPAP2C-001	1265	288aa	ENSP00000269812.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS12023	O43688	NM_177526.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000327790.3	PPAP2C-004	1034	309aa	ENSP00000329697.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS12024	O43688	NM_177543.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000434325.2	PPAP2C-003	926	232aa	ENSP00000388565.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS45889	O43688	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000591572.1	PPAP2C-005	546	166aa	ENSP00000466545.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		K7EMK9	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000586998.1	PPAP2C-007	541	136aa	ENSP00000466947.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000589672.1	PPAP2C-006	1102	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 2, Coding exons: 0, Transcript length: 1,102 bps,

Version

ENST00000589672.1

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000451780 (version 1)

Favourite species

All species

Recent locations

Transcript: ENST00000589672.1 PPAP2C-006

Summary