Transcript: ENST00000327790.3 PPAP2C-004

Description

phosphatidic acid phosphatase type 2C [Source:HGNC Symbol;Acc:9230]

Gene Synonyms

LPP2, PAP-2c, PAP2-g

Location

Chromosome 19: 281,388-291,170 reverse strand.

About this transcript

This transcript has 6 exons, is annotated with 12 domains and features, is associated with 5095 variant alleles and maps to 310 oligo probes.

Gene

This transcript is a product of gene ENSG00000141934.5 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000269812.3	PPAP2C-001	1265	288aa	ENSP00000269812.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS12023	O43688	NM_177526.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000327790.3	PPAP2C-004	1034	309aa	ENSP00000329697.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS12024	O43688	NM_177543.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000434325.2	PPAP2C-003	926	232aa	ENSP00000388565.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS45889	O43688	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000591572.1	PPAP2C-005	546	166aa	ENSP00000466545.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		K7EMK9	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000586998.1	PPAP2C-007	541	136aa	ENSP00000466947.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000589672.1	PPAP2C-006	1102	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 6, Coding exons: 6, Transcript length: 1,034 bps, Translation length: 309 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: O43688

CCDS

This transcript is a member of the Human CCDS set: CCDS12024

Version

ENST00000327790.3

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000451779 (version 3)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000327790.3 PPAP2C-004

Summary