Transcript: ENST00000529652.1 FOXK2-003

Description

forkhead box K2 [Source:HGNC Symbol;Acc:6036]

Gene Synonyms

ILF, ILF-1, ILF1

Location

Chromosome 17: 80,551,298-80,560,281 forward strand.

About this transcript

This transcript has 4 exons, is associated with 4861 variant alleles and maps to 345 oligo probes.

Gene

This transcript is a product of gene ENSG00000141568.15 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000335255.5	FOXK2-001	5265	660aa	ENSP00000335677.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS11813	E9PM37 Q01167	NM_004514.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000531030.1	FOXK2-004	805	172aa	ENSP00000433167.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E9PM37	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000526383.2	FOXK2-005	786	253aa	ENSP00000432663.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E9PM37 E9PPI7	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000575578.1	FOXK2-011	571	129aa	ENSP00000461540.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000473637.2	FOXK2-002	3462	614aa	ENSP00000436108.2	Nonsense mediated decay		E9PM37 Q01167	-	-
ENST00000529652.1	FOXK2-003	2199	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000574694.1	FOXK2-013	731	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000571989.1	FOXK2-012	573	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000571160.1	FOXK2-010	496	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000527313.2	FOXK2-006	779	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000570585.1	FOXK2-009	756	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 4, Coding exons: 0, Transcript length: 2,199 bps,

Version

ENST00000529652.1

Type

Processed transcript

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000391060 (version 1)

Favourite species

All species

Recent locations

Transcript: ENST00000529652.1 FOXK2-003

Summary