Transcript: ENST00000473637.2 FOXK2-002

Description

forkhead box K2 [Source:HGNC Symbol;Acc:6036]

Gene Synonyms

ILF, ILF-1, ILF1

Location

Chromosome 17: 80,477,589-80,560,268 forward strand.

About this transcript

This transcript has 10 exons, is annotated with 22 domains and features, is associated with 43846 variant alleles and maps to 607 oligo probes.

Gene

This transcript is a product of gene ENSG00000141568.15 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000335255.5	FOXK2-001	5265	660aa	ENSP00000335677.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS11813	E9PM37 Q01167	NM_004514.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000531030.1	FOXK2-004	805	172aa	ENSP00000433167.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E9PM37	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000526383.2	FOXK2-005	786	253aa	ENSP00000432663.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E9PM37 E9PPI7	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000575578.1	FOXK2-011	571	129aa	ENSP00000461540.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000473637.2	FOXK2-002	3462	614aa	ENSP00000436108.2	Nonsense mediated decay		E9PM37 Q01167	-	-
ENST00000529652.1	FOXK2-003	2199	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000574694.1	FOXK2-013	731	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000571989.1	FOXK2-012	573	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000571160.1	FOXK2-010	496	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000527313.2	FOXK2-006	779	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000570585.1	FOXK2-009	756	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 10, Coding exons: 9, Transcript length: 3,462 bps, Translation length: 614 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q01167

Version

ENST00000473637.2

Type

Nonsense mediated decay

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000277100 (version 3)

Favourite species

All species

Recent locations

Transcript: ENST00000473637.2 FOXK2-002

Summary