Transcript: ENST00000407215.3 SCRN2-002

Description

secernin 2 [Source:HGNC Symbol;Acc:30381]

Gene Synonyms

Ses2

Location

Chromosome 17: 45,915,058-45,918,655 reverse strand.

About this transcript

This transcript has 7 exons, is annotated with 5 domains and features, is associated with 1994 variant alleles and maps to 424 oligo probes.

Gene

This transcript is a product of gene ENSG00000141295.9 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000407215.3	SCRN2-002	1779	378aa	ENSP00000383935.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS45723	J3QR84 Q96FV2	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000584123.1	SCRN2-006	1745	433aa	ENSP00000463411.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		J3QL71 J3QR84	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000290216.9	SCRN2-001	1548	425aa	ENSP00000290216.9	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS11519	J3QR84 Q96FV2	NM_138355.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000584567.1	SCRN2-011	932	269aa	ENSP00000463809.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000578323.1	SCRN2-013	624	180aa	ENSP00000464093.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		J3QR84	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000582459.1	SCRN2-004	1624	127aa	ENSP00000462845.1	Nonsense mediated decay		J3KT79	-	-
ENST00000581645.1	SCRN2-003	1477	271aa	ENSP00000464246.1	Nonsense mediated decay		J3QR84 J3QRJ1	-	-
ENST00000579856.1	SCRN2-008	952	97aa	ENSP00000462318.1	Nonsense mediated decay		J3KS57	-	-
ENST00000583090.1	SCRN2-010	683	97aa	ENSP00000464105.1	Nonsense mediated decay		J3KS57	-	-
ENST00000581546.1	SCRN2-005	1237	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000578840.1	SCRN2-009	912	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000580428.1	SCRN2-007	717	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000582656.1	SCRN2-012	550	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 7, Coding exons: 6, Transcript length: 1,779 bps, Translation length: 378 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q96FV2

CCDS

This transcript is a member of the Human CCDS set: CCDS45723

Version

ENST00000407215.3

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000441382 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000407215.3 SCRN2-002

Summary