Transcript: ENST00000436021.2 TDG-007

Description

thymine-DNA glycosylase [Source:HGNC Symbol;Acc:11700]

Gene Synonyms

hTDG

Location

Chromosome 12: 104,359,600-104,376,588 forward strand.

About this transcript

This transcript has 6 exons, is annotated with 6 domains and features, is associated with 7881 variant alleles and maps to 252 oligo probes.

Gene

This transcript is a product of gene ENSG00000139372.10 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000392872.3	TDG-001	3251	410aa	ENSP00000376611.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS9095	B4E127 F5H539 Q13569	NM_003211.4	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000266775.9	TDG-003	1602	406aa	ENSP00000266775.9	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B4E127 F5H539 G8JL98	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000544861.1	TDG-004	1387	267aa	ENSP00000445899.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B4E127	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000542036.1	TDG-201	1014	206aa	ENSP00000439054.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B4DI29	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000537100.1	TDG-008	923	257aa	ENSP00000439825.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F5H0I7	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000436021.2	TDG-007	824	138aa	ENSP00000390167.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F5H539	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000540956.1	TDG-006	1014	111aa	ENSP00000445716.1	Nonsense mediated decay		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000536395.1	TDG-010	665	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000542926.1	TDG-009	1277	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000544060.1	TDG-005	1139	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000545698.1	TDG-002	862	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 6, Coding exons: 4, Transcript length: 824 bps, Translation length: 138 residues

Incomplete CDS

3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete

Version

ENST00000436021.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000399674 (version 1)

Favourite species

All species

Recent locations

Transcript: ENST00000436021.2 TDG-007

Summary