Transcript: ENST00000547376.1 PTPRQ-003

Description

protein tyrosine phosphatase, receptor type, Q [Source:HGNC Symbol;Acc:9679]

Gene Synonyms

DFNB84

Location

Chromosome 12: 80,814,531-80,839,304 forward strand.

About this transcript

This transcript has 12 exons, is annotated with 18 domains and features, is associated with 10283 variant alleles and maps to 118 oligo probes.

Gene

This transcript is a product of gene ENSG00000139304.8 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	RefSeq	Flags
ENST00000266688.5	PTPRQ-201	6888	2295aa	ENSP00000266688.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9UMZ3	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000551042.1	PTPRQ-002	2336	332aa	ENSP00000447522.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F8W122	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000547376.1	PTPRQ-003	1702	353aa	ENSP00000448844.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F8VXI2	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000551573.1	PTPRQ-004	1097	283aa	ENSP00000449133.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F8VW52	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000547881.1	PTPRQ-006	439	146aa	ENSP00000449526.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENST00000547485.1	PTPRQ-008	604	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-	-	-
ENST00000526956.2	PTPRQ-009	568	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-	-	-
ENST00000551624.1	PTPRQ-007	829	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-	-
ENST00000549355.1	PTPRQ-010	567	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-	-

Summary

Statistics

Exons: 12, Coding exons: 8, Transcript length: 1,702 bps, Translation length: 353 residues

Incomplete CDS

3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete

Version

ENST00000547376.1

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000407746 (version 1)

Favourite species

All species

Recent locations

Transcript: ENST00000547376.1 PTPRQ-003

Summary