Transcript: ENST00000488918.2 ARHGEF39-005

Description

Rho guanine nucleotide exchange factor (GEF) 39 [Source:HGNC Symbol;Acc:25909]

Gene Synonyms

C9orf100, FLJ14642, RP11-331F9.7

Location

About this transcript

This transcript has 3 exons, is associated with 408 variant alleles and maps to 166 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000378387.3	ARHGEF39-001	3769	335aa	ENSP00000367638.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS6584	Q8N4T4	NM_032818.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000378395.2	ARHGEF39-202	3543	299aa	ENSP00000367648.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q8N4T4	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000343259.3	ARHGEF39-201	3404	186aa	ENSP00000344922.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q8N4T4	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000490638.1	ARHGEF39-004	4498	299aa	ENSP00000436756.1	Nonsense mediated decay		Q8N4T4	-	-
ENST00000475323.1	ARHGEF39-003	2862	186aa	ENSP00000436519.1	Nonsense mediated decay		Q8N4T4	-	-
ENST00000490970.1	ARHGEF39-002	1270	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000468876.1	ARHGEF39-006	739	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000488918.2	ARHGEF39-005	347	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 3, Coding exons: 0, Transcript length: 347 bps,

Version

ENST00000488918.2

Type

Processed transcript

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000052334 (version 2)