Transcript: ENST00000439615.1 SMPD2-002

Description

sphingomyelin phosphodiesterase 2, neutral membrane (neutral sphingomyelinase) [Source:HGNC Symbol;Acc:11121]

Gene Synonyms

ISC1, NSMASE, NSMASE1, nSMase

Location

About this transcript

This transcript has 3 exons, is associated with 514 variant alleles and maps to 235 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000258052.3	SMPD2-001	1645	423aa	ENSP00000258052.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS5075	O60906	NM_003080.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000458487.1	SMPD2-003	613	204aa	ENSP00000399731.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENST00000439615.1	SMPD2-002	482	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 3, Coding exons: 0, Transcript length: 482 bps,

Version

ENST00000439615.1

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000041756 (version 2)