Transcript: ENST00000533067.1 GIF-005

Description

gastric intrinsic factor (vitamin B synthesis) [Source:HGNC Symbol;Acc:4268]

Gene Synonyms

IF, IFMH, INF, TCN3

Location

About this transcript

This transcript has 2 exons, is associated with 2287 variant alleles and maps to 126 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000541311.1	GIF-201	1623	392aa	ENSP00000440427.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		P27352	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000257248.2	GIF-001	1518	417aa	ENSP00000257248.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS7977	P27352	NM_005142.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000525058.1	GIF-003	1623	48aa	ENSP00000433196.1	Nonsense mediated decay		E9PM21	-	-
ENST00000532070.1	GIF-002	977	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000533847.1	GIF-004	745	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000533067.1	GIF-005	386	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 2, Coding exons: 0, Transcript length: 386 bps,

Version

ENST00000533067.1

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000394499 (version 1)