Transcript: ENST00000602318.1 LAMTOR5-007

Description

late endosomal/lysosomal adaptor, MAPK and MTOR activator 5 [Source:HGNC Symbol;Acc:17955]

Gene Synonyms

HBXIP, MGC71071, XIP

Location

Chromosome 1: 110,943,875-110,950,330 reverse strand.

About this transcript

This transcript has 4 exons, is annotated with 5 domains and features, is associated with 2897 variant alleles and maps to 266 oligo probes.

Gene

This transcript is a product of gene ENSG00000134248.9 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000474861.2	LAMTOR5-003	1154	90aa	ENSP00000434828.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E9PLX3 R4GMU8	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000256644.4	LAMTOR5-001	868	173aa	ENSP00000256644.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS824	O43504 R4GMU8	NM_006402.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000483260.1	LAMTOR5-004	694	90aa	ENSP00000435085.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E9PLX3 R4GMU8	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000602318.1	LAMTOR5-007	634	91aa	ENSP00000473439.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		O43504 R4GMU8	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000602858.1	LAMTOR5-008	553	79aa	ENSP00000473357.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		R4GMU8	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000464240.1	LAMTOR5-002	1830	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000531779.1	LAMTOR5-006	569	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 4, Coding exons: 4, Transcript length: 634 bps, Translation length: 91 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: O43504

Version

ENST00000602318.1

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000467909 (version 1)

Annotation Attributes

RP supported TIS [Definitions]

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000602318.1 LAMTOR5-007

Summary