Transcript: ENST00000256644.4 LAMTOR5-001

Description

late endosomal/lysosomal adaptor, MAPK and MTOR activator 5 [Source:HGNC Symbol;Acc:17955]

Gene Synonyms

HBXIP, MGC71071, XIP

Location

Chromosome 1: 110,943,875-110,950,564 reverse strand.

About this transcript

This transcript has 4 exons, is annotated with 4 domains and features, is associated with 3106 variant alleles and maps to 297 oligo probes.

Gene

This transcript is a product of gene ENSG00000134248.9 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000474861.2	LAMTOR5-003	1154	90aa	ENSP00000434828.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E9PLX3 R4GMU8	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000256644.4	LAMTOR5-001	868	173aa	ENSP00000256644.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS824	O43504 R4GMU8	NM_006402.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000483260.1	LAMTOR5-004	694	90aa	ENSP00000435085.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E9PLX3 R4GMU8	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000602318.1	LAMTOR5-007	634	91aa	ENSP00000473439.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		O43504 R4GMU8	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000602858.1	LAMTOR5-008	553	79aa	ENSP00000473357.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		R4GMU8	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000464240.1	LAMTOR5-002	1830	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000531779.1	LAMTOR5-006	569	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 4, Coding exons: 4, Transcript length: 868 bps, Translation length: 173 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: O43504

CCDS

This transcript is a member of the Human CCDS set: CCDS824

Version

ENST00000256644.4

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000031966 (version 3)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000256644.4 LAMTOR5-001

Summary