Transcript: ENST00000465187.1 EDEM1-005

Description

ER degradation enhancer, mannosidase alpha-like 1 [Source:HGNC Symbol;Acc:18967]

Gene Synonyms

EDEM, KIAA0212

Location

About this transcript

This transcript has 2 exons, is associated with 4008 variant alleles and maps to 104 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000256497.4	EDEM1-001	6146	657aa	ENSP00000256497.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS33686	Q92611	NM_014674.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000445686.1	EDEM1-003	1363	376aa	ENSP00000394099.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B4DXP3	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000434243.1	EDEM1-004	978	78aa	ENSP00000393659.1	Nonsense mediated decay		F8WER9	-	-
ENST00000443790.1	EDEM1-007	730	53aa	ENSP00000394615.1	Nonsense mediated decay		F8WE67	-	-
ENST00000465369.1	EDEM1-002	1956	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000465187.1	EDEM1-005	585	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000492751.1	EDEM1-006	307	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 2, Coding exons: 0, Transcript length: 585 bps,

Version

ENST00000465187.1

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000337588 (version 1)