Transcript: ENST00000566354.1 VPS4A-001

Description

vacuolar protein sorting 4 homolog A (S. cerevisiae) [Source:HGNC Symbol;Acc:13488]

Gene Synonyms

FLJ22197, SKD1, SKD1A, SKD2, VPS4, VPS4-1

Location

About this transcript

This transcript has 2 exons, is associated with 2426 variant alleles and maps to 224 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000254950.11	VPS4A-002	2203	437aa	ENSP00000254950.11	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS45517	Q9UF30 Q9UN37	NM_013245.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000564399.1	VPS4A-003	471	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000566354.1	VPS4A-001	2329	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000562754.1	VPS4A-004	633	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 2, Coding exons: 0, Transcript length: 2,329 bps,

Version

ENST00000566354.1

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000430566 (version 1)