Transcript: ENST00000518158.1 GFPT2-006

Description

glutamine-fructose-6-phosphate transaminase 2 [Source:HGNC Symbol;Acc:4242]

Gene Synonyms

GFAT2

Location

Chromosome 5: 179,758,412-179,780,336 reverse strand.

About this transcript

This transcript has 5 exons, is associated with 10790 variant alleles and maps to 159 oligo probes.

Gene

This transcript is a product of gene ENSG00000131459.8 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000253778.8	GFPT2-001	3093	682aa	ENSP00000253778.8	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS43411	B3KM63 O94808	NM_005110.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000518906.1	GFPT2-005	697	216aa	ENSP00000431125.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E5RJP4	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000503228.1	GFPT2-002	557	178aa	ENSP00000422771.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		D6RAC1	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000520165.1	GFPT2-008	657	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000518185.1	GFPT2-007	608	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000503546.1	GFPT2-003	943	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000518158.1	GFPT2-006	601	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000510122.1	GFPT2-004	515	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 5, Coding exons: 0, Transcript length: 601 bps,

Version

ENST00000518158.1

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000373911 (version 1)

Favourite species

All species

Recent locations

Transcript: ENST00000518158.1 GFPT2-006

Summary