Transcript: ENST00000253778.8 GFPT2-001

Description

glutamine-fructose-6-phosphate transaminase 2 [Source:HGNC Symbol;Acc:4242]

Gene Synonyms

GFAT2

Location

Chromosome 5: 179,727,690-179,780,387 reverse strand.

About this transcript

This transcript has 19 exons, is annotated with 18 domains and features, is associated with 26576 variant alleles and maps to 607 oligo probes.

Gene

This transcript is a product of gene ENSG00000131459.8 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000253778.8	GFPT2-001	3093	682aa	ENSP00000253778.8	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS43411	B3KM63 O94808	NM_005110.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000518906.1	GFPT2-005	697	216aa	ENSP00000431125.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E5RJP4	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000503228.1	GFPT2-002	557	178aa	ENSP00000422771.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		D6RAC1	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000520165.1	GFPT2-008	657	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000518185.1	GFPT2-007	608	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000503546.1	GFPT2-003	943	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000518158.1	GFPT2-006	601	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000510122.1	GFPT2-004	515	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 19, Coding exons: 19, Transcript length: 3,093 bps, Translation length: 682 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: O94808

CCDS

This transcript is a member of the Human CCDS set: CCDS43411

Version

ENST00000253778.8

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000373444 (version 4)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000253778.8 GFPT2-001

Summary