Transcript: ENST00000253451.4 CCL25-001

Description

chemokine (C-C motif) ligand 25 [Source:HGNC Symbol;Acc:10624]

Gene Synonyms

Ckb15, SCYA25, TECK

Location

About this transcript

This transcript has 6 exons, is annotated with 8 domains and features, is associated with 5296 variant alleles and maps to 327 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000253451.4	CCL25-001	953	149aa	ENSP00000253451.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS56080	O15444	NM_005624.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000390669.3	CCL25-003	924	150aa	ENSP00000375086.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS12194	O15444	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000315626.4	CCL25-201	361	84aa	ENSP00000324756.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9JDZ7	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000458625.1	CCL25-002	744	84aa	ENSP00000401882.1	Nonsense mediated decay		C9JDZ7	-	-

Summary

Statistics

Exons: 6, Coding exons: 5, Transcript length: 953 bps, Translation length: 149 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: O15444

CCDS

This transcript is a member of the Human CCDS set: CCDS56080

Version

ENST00000253451.4

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000280520 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.