Transcript: ENST00000264554.6 SHC2-001

Description

SHC (Src homology 2 domain containing) transforming protein 2 [Source:HGNC Symbol;Acc:29869]

Gene Synonyms

SCK, SHCB, SLI

Location

Chromosome 19: 416,583-460,996 reverse strand.

About this transcript

This transcript has 13 exons, is annotated with 25 domains and features, is associated with 27768 variant alleles and maps to 417 oligo probes.

Gene

This transcript is a product of gene ENSG00000129946.6 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000264554.6	SHC2-001	2494	582aa	ENSP00000264554.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS45891	P98077	NM_012435.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000590113.2	SHC2-011	605	143aa	ENSP00000475250.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000591388.1	SHC2-005	473	99aa	ENSP00000476217.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000590222.1	SHC2-007	951	69aa	ENSP00000466869.1	Nonsense mediated decay		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000590170.1	SHC2-009	806	65aa	ENSP00000465764.1	Nonsense mediated decay		K7EKS8	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000589922.1	SHC2-002	2650	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000587423.1	SHC2-004	1697	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000588376.1	SHC2-003	1557	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 13, Coding exons: 12, Transcript length: 2,494 bps, Translation length: 582 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: P98077

CCDS

This transcript is a member of the Human CCDS set: CCDS45891

Version

ENST00000264554.6

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000451840 (version 3)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000264554.6 SHC2-001

Summary